STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHM38247.1TonB-dependent receptor; KEGG: ddd:Dda3937_04300 1.4e-29 fepA; TonB-dependent receptor; outer membrane receptor for ferrienterochelin and colicins K02014; Psort location: OuterMembrane, score: 10.00. (693 aa)    
Predicted Functional Partners:
EHM38243.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
 
    0.913
EHM38245.1
Putative ferrichrome transport system permease protein FhuG; KEGG: bgl:bglu_1g28200 6.8e-21 ABC-type cobalamin/Fe3 -siderophores transport systems ATPase component; K02013 iron complex transport system ATP-binding protein; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
  
 0.862
EHM38248.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.82.
 
    0.860
EHM38246.1
KEGG: bha:BH1081 2.2e-60 fhuC; ferrichrome ABC transporter ATP-binding protein; K02013 iron complex transport system ATP-binding protein; Psort location: Cytoplasmic, score: 9.12.
 
    0.843
EHM38244.1
Hypothetical protein.
  
    0.792
EHM38253.1
Flavodoxin; KEGG: msu:MS0176 0.00033 hemG; protoporphyrinogen oxidase K00230.
     0.712
EHM43130.1
Transporter, MotA/TolQ/ExbB proton channel family protein; KEGG: apb:SAR116_2296 1.1e-08 biopolymer transport protein K03562; Psort location: CytoplasmicMembrane, score: 10.00.
 
  
 0.710
EHM42870.1
Hypothetical protein; KEGG: bme:BMEI1894 1.0e-12 gramicidin S biosynthesis GrsT protein K09800.
  
     0.682
EHM42869.1
KEGG: vap:Vapar_4267 8.8e-11 RND efflux system, outer membrane lipoprotein, NodT family K00694; Psort location: OuterMembrane, score: 10.00.
  
   
 0.672
EHM42653.1
TonB-dependent receptor; KEGG: dya:Dyak_GE16198 1.1e-06 GE16198 gene product from transcript GE16198-RA; K13761 high affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9.
  
 
 0.618
Your Current Organism:
Anaeroglobus geminatus
NCBI taxonomy Id: 861450
Other names: A. geminatus F0357, Anaeroglobus geminatus F0357, Anaeroglobus geminatus str. F0357, Anaeroglobus geminatus strain F0357
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