STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHM37826.1Hypothetical protein; KEGG: cba:CLB_2345 2.8e-37 prdD; PrdD protein; K10795 D-proline reductase (dithiol) PrdD; Psort location: Cytoplasmic, score: 9.97. (405 aa)    
Predicted Functional Partners:
EHM44066.1
DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...]
   
 0.989
EHM41646.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
   
 0.988
polA
DNA-directed DNA polymerase; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity.
   
 0.953
EHM42289.1
Hypothetical protein; KEGG: amt:Amet_0665 9.7e-27 D-proline reductase (dithiol) K10793; Psort location: Cytoplasmic, score: 9.26.
  
  0.933
EHM37825.1
KEGG: cbl:CLK_3048 5.7e-87 prdB-2; D-proline reductase, PrdB subunit K10794; Psort location: Cytoplasmic, score: 9.97.
  
  0.919
EHM40683.1
KEGG: vpr:Vpar_1386 6.0e-154 ATP-dependent DNA helicase RecQ; K03654 ATP-dependent DNA helicase RecQ; Psort location: Cytoplasmic, score: 9.97.
   
 0.862
EHM37822.1
Respiratory-chain NADH dehydrogenase subunit; KEGG: eci:UTI89_C1819 2.9e-24 rnfC; electron transport complex protein RnfC K03615; Psort location: Cytoplasmic, score: 8.96.
 
     0.848
EHM42169.1
D-proline reductase, PrdB subunit domain protein; KEGG: aoe:Clos_0030 3.0e-56 D-proline reductase (dithiol) K10794; Psort location: Cytoplasmic, score: 9.26.
  
  0.840
EHM44008.1
KEGG: azo:azo0200 7.6e-131 sbcC; exonuclease SbcC, putative K03546; Psort location: Extracellular, score: 8.89.
   
  0.824
EHM42170.1
Hypothetical protein; KEGG: cdl:CDR20291_3101 2.2e-30 prdB; proline reductase; K10794 D-proline reductase (dithiol) PrdB; Psort location: Cytoplasmic, score: 9.26.
 
     0.789
Your Current Organism:
Anaeroglobus geminatus
NCBI taxonomy Id: 861450
Other names: A. geminatus F0357, Anaeroglobus geminatus F0357, Anaeroglobus geminatus str. F0357, Anaeroglobus geminatus strain F0357
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