STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHM37654.1Hypothetical protein. (74 aa)    
Predicted Functional Partners:
EHM42653.1
TonB-dependent receptor; KEGG: dya:Dyak_GE16198 1.1e-06 GE16198 gene product from transcript GE16198-RA; K13761 high affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9.
  
 
 0.618
EHM43387.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
    
   0.557
EHM37737.1
Hypothetical protein; KEGG: isc:IscW_ISCW014473 0.0021 basement membrane collagen, putative.
    
   0.557
EHM41511.1
Putative TonB-dependent copper receptor; Psort location: OuterMembrane, score: 9.92.
   
 
 0.449
EHM37552.1
Outer membrane insertion signal domain protein; KEGG: ccv:CCV52592_1811 0.0018 diaminopimelate epimerase (DAP epimerase); Psort location: OuterMembrane, score: 9.49.
      0.442
EHM37553.1
TonB-dependent receptor plug domain protein; KEGG: ddd:Dda3937_04300 3.6e-17 fepA; TonB-dependent receptor; outer membrane receptor for ferrienterochelin and colicins K02014; Psort location: OuterMembrane, score: 9.93.
      0.442
Your Current Organism:
Anaeroglobus geminatus
NCBI taxonomy Id: 861450
Other names: A. geminatus F0357, Anaeroglobus geminatus F0357, Anaeroglobus geminatus str. F0357, Anaeroglobus geminatus strain F0357
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