STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHM37597.1Hypothetical protein. (77 aa)    
Predicted Functional Partners:
EHM37599.1
CRISPR-associated RAMP protein, Csm4 family; Psort location: Cytoplasmic, score: 8.96.
  
 
 0.992
EHM37600.1
CRISPR-associated RAMP protein, Csm3 family; Psort location: Cytoplasmic, score: 8.96.
  
 
 0.989
EHM37601.1
CRISPR-associated protein, Csm2 family; Psort location: Cytoplasmic, score: 8.96.
  
 
 0.989
EHM37602.1
Hypothetical protein.
  
 
 0.941
EHM37603.1
CRISPR-associated protein, Csm1 family; KEGG: llk:LLKF_2093 0.0023 ytgF; 2,3-cyclic-nucleotide 2-phosphodiesterase K06950; Psort location: Cytoplasmic, score: 8.96.
  
 
 0.941
EHM37598.1
CRISPR-associated RAMP protein, Csm5 family; Psort location: Cytoplasmic, score: 8.96.
      0.931
EHM37595.1
CRISPR-associated protein, Csm6 family; Psort location: Cytoplasmic, score: 8.96.
  
  
 0.861
cas2
CRISPR-associated protein Cas2; CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Functions as a ssRNA-specific endoribonuclease. Involved in the integration of spacer DNA into the CRISPR cassette.
     
 0.734
cas1
CRISPR-associated endonuclease Cas1; CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette.
       0.702
EHM37596.1
Putative CRISPR-associated endoribonuclease Cas6; Psort location: Cytoplasmic, score: 8.96.
     
 0.648
Your Current Organism:
Anaeroglobus geminatus
NCBI taxonomy Id: 861450
Other names: A. geminatus F0357, Anaeroglobus geminatus F0357, Anaeroglobus geminatus str. F0357, Anaeroglobus geminatus strain F0357
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.