STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hisSHypothetical protein; KEGG: fnu:FN0298 1.9e-198 histidyl-tRNA synthetase K01892; Psort location: Cytoplasmic, score: 10.00. (413 aa)    
Predicted Functional Partners:
aspS
Hypothetical protein; Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction: L-aspartate is first activated by ATP to form Asp- AMP and then transferred to the acceptor end of tRNA(Asp). Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily.
 
  
 0.973
EHI79513.1
Hypothetical protein; KEGG: ava:Ava_B0112 4.1e-84 recombination factor protein RarA/unknown domain fusion protein K07478; Psort location: Cytoplasmic, score: 9.26.
       0.777
metG
Hypothetical protein; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.
 
 
 0.739
glyQ
KEGG: fnu:FN0069 2.1e-158 glyQ; glycyl-tRNA synthetase subunit alpha K01878; Psort location: Cytoplasmic, score: 9.97.
  
  
 0.707
thrS
threonine--tRNA ligase; Catalyzes the attachment of threonine to tRNA(Thr) in a two- step reaction: L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr).
  
 
 0.703
guaA
Hypothetical protein; Catalyzes the synthesis of GMP from XMP.
  
  
 0.690
EHI78396.1
Hypothetical protein; KEGG: fnu:FN2011 4.7e-218 valyl-tRNA synthetase K01873; Psort location: Cytoplasmic, score: 9.97.
 
 
 0.687
lysS
Hypothetical protein; KEGG: fnu:FN0466 3.1e-260 lysyl-tRNA synthetase K04567; Psort location: Cytoplasmic, score: 10.00; Belongs to the class-II aminoacyl-tRNA synthetase family.
  
 
 0.685
prs
Hypothetical protein; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib- 5-P); Belongs to the ribose-phosphate pyrophosphokinase family. Class I subfamily.
  
 
 0.681
alaS
Hypothetical protein; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain.
  
 
 0.677
Your Current Organism:
Fusobacterium sp. F0437
NCBI taxonomy Id: 861452
Other names: F. sp. oral taxon 370 str. F0437, Fusobacterium sp. oral taxon 370 str. F0437
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.