STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHI78498.1Hypothetical protein; KEGG: apb:SAR116_0249 1.6e-59 TRAP dicarboxylate transporter-DctM subunit; Psort location: CytoplasmicMembrane, score: 10.00. (617 aa)    
Predicted Functional Partners:
EHI78497.1
Hypothetical protein; KEGG: apb:SAR116_0250 5.5e-25 TRAP dicarboxylate transporter-DctP subunit; Psort location: Periplasmic, score: 10.00.
  
 0.981
EHI79178.1
Bacterial extracellular solute-binding protein, family 7; KEGG: apb:SAR116_0250 2.2e-14 TRAP dicarboxylate transporter-DctP subunit; Psort location: Periplasmic, score: 9.76.
 
  
 0.939
EHI79179.1
TRAP transporter, DctQ-like membrane protein; KEGG: apb:SAR116_0248 0.0022 C4-dicarboxylate transport system, permease small protein, putative; Psort location: CytoplasmicMembrane, score: 10.00.
 
 0.929
nanA
Hypothetical protein; Catalyzes the reversible aldol cleavage of N-acetylneuraminic acid (sialic acid; Neu5Ac) to form pyruvate and N-acetylmannosamine (ManNAc) via a Schiff base intermediate.
     
 0.868
EHI78499.1
Hypothetical protein; KEGG: fnu:FN1474 1.9e-127 N-acetylmannosamine kinase; Psort location: Cytoplasmic, score: 9.97.
  
  
 0.828
nanE
Hypothetical protein; Converts N-acetylmannosamine-6-phosphate (ManNAc-6-P) to N- acetylglucosamine-6-phosphate (GlcNAc-6-P).
     
 0.819
EHI79180.1
TRAP transporter, DctM subunit; KEGG: apb:SAR116_0249 1.3e-64 TRAP dicarboxylate transporter-DctM subunit; Psort location: CytoplasmicMembrane, score: 10.00.
 
0.802
EHI79532.1
Hypothetical protein; KEGG: fnu:FN1170 0. pyruvate-flavodoxin oxidoreductase K03737; Psort location: Cytoplasmic, score: 8.96.
    
  0.722
EHI79533.1
Hypothetical protein; KEGG: fnu:FN1170 6.5e-212 pyruvate-flavodoxin oxidoreductase K03737; Psort location: Cytoplasmic, score: 8.96.
    
  0.722
EHI79024.1
Hypothetical protein; KEGG: fnu:FN1421 0. pyruvate-flavodoxin oxidoreductase K03737.
    
  0.722
Your Current Organism:
Fusobacterium sp. F0437
NCBI taxonomy Id: 861452
Other names: F. sp. oral taxon 370 str. F0437, Fusobacterium sp. oral taxon 370 str. F0437
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