STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nop9Nucleolar protein 9; RNA-binding nucleolar protein required for pre-rRNA processing. Involved in production of 18S rRNA and assembly of small ribosomal subunit (By similarity); Belongs to the NOP9 family. (700 aa)    
Predicted Functional Partners:
PTT_14253
Sas10 domain-containing protein.
   
   0.968
PTT_10251
Uncharacterized protein.
   
 
 0.906
PTT_20246
Uncharacterized protein.
   
 
 0.873
PTT_19767
PUM-HD domain-containing protein.
   
  
 0.865
PTT_13155
Nop domain-containing protein.
   
   0.861
PTT_17014
Uncharacterized protein.
   
 
 0.861
PTT_04825
CBF domain-containing protein.
   
 
 0.855
PTT_17827
Uncharacterized protein.
   
 
 0.853
PTT_11259
Brix domain-containing protein.
   
    0.843
ERB1
Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
   0.839
Your Current Organism:
Pyrenophora teres
NCBI taxonomy Id: 861557
Other names: P. teres f. teres 0-1, Pyrenophora teres f. teres 0-1
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