Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ERB1 | PTT_04825 | E3S3T4 | E3REN2 | Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | CBF domain-containing protein. | 0.923 |
ERB1 | PTT_10251 | E3S3T4 | E3RNT7 | Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | Uncharacterized protein. | 0.925 |
ERB1 | PTT_11259 | E3S3T4 | E3RR48 | Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | Brix domain-containing protein. | 0.984 |
ERB1 | PTT_13155 | E3S3T4 | E3RVG4 | Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | Nop domain-containing protein. | 0.976 |
ERB1 | PTT_14253 | E3S3T4 | E3RXU3 | Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | Sas10 domain-containing protein. | 0.710 |
ERB1 | PTT_17014 | E3S3T4 | E3S3G9 | Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | Uncharacterized protein. | 0.965 |
ERB1 | PTT_17827 | E3S3T4 | E3S5C5 | Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | Uncharacterized protein. | 0.916 |
ERB1 | PTT_19767 | E3S3T4 | E3S9N1 | Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | PUM-HD domain-containing protein. | 0.767 |
ERB1 | PTT_20246 | E3S3T4 | E3SAM6 | Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | Uncharacterized protein. | 0.668 |
ERB1 | nop9 | E3S3T4 | E3RP32 | Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | Nucleolar protein 9; RNA-binding nucleolar protein required for pre-rRNA processing. Involved in production of 18S rRNA and assembly of small ribosomal subunit (By similarity); Belongs to the NOP9 family. | 0.839 |
PTT_04825 | ERB1 | E3REN2 | E3S3T4 | CBF domain-containing protein. | Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | 0.923 |
PTT_04825 | PTT_10251 | E3REN2 | E3RNT7 | CBF domain-containing protein. | Uncharacterized protein. | 0.782 |
PTT_04825 | PTT_11259 | E3REN2 | E3RR48 | CBF domain-containing protein. | Brix domain-containing protein. | 0.950 |
PTT_04825 | PTT_13155 | E3REN2 | E3RVG4 | CBF domain-containing protein. | Nop domain-containing protein. | 0.930 |
PTT_04825 | PTT_14253 | E3REN2 | E3RXU3 | CBF domain-containing protein. | Sas10 domain-containing protein. | 0.814 |
PTT_04825 | PTT_17014 | E3REN2 | E3S3G9 | CBF domain-containing protein. | Uncharacterized protein. | 0.982 |
PTT_04825 | PTT_17827 | E3REN2 | E3S5C5 | CBF domain-containing protein. | Uncharacterized protein. | 0.863 |
PTT_04825 | PTT_19767 | E3REN2 | E3S9N1 | CBF domain-containing protein. | PUM-HD domain-containing protein. | 0.954 |
PTT_04825 | PTT_20246 | E3REN2 | E3SAM6 | CBF domain-containing protein. | Uncharacterized protein. | 0.720 |
PTT_04825 | nop9 | E3REN2 | E3RP32 | CBF domain-containing protein. | Nucleolar protein 9; RNA-binding nucleolar protein required for pre-rRNA processing. Involved in production of 18S rRNA and assembly of small ribosomal subunit (By similarity); Belongs to the NOP9 family. | 0.855 |
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