Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
PTT_06244 | PTT_07734 | E3RFF9 | E3RIA6 | Uncharacterized protein. | Signal peptidase subunit 3. | 0.992 |
PTT_06244 | PTT_16967 | E3RFF9 | E3S3D3 | Uncharacterized protein. | Uncharacterized protein. | 0.996 |
PTT_06244 | sec11 | E3RFF9 | E3RR70 | Uncharacterized protein. | Signal peptidase complex catalytic subunit sec11; Catalytic component of the signal peptidase complex (SPC), which catalyzes the cleavage of N-terminal signal sequences of proteins targeted to the endoplasmic reticulum. Signal peptide cleavage occurs during the translocation (cotranslationally or post-translationally) through the translocon pore into the endoplasmic reticulum (By similarity). | 0.985 |
PTT_07734 | PTT_06244 | E3RIA6 | E3RFF9 | Signal peptidase subunit 3. | Uncharacterized protein. | 0.992 |
PTT_07734 | PTT_16967 | E3RIA6 | E3S3D3 | Signal peptidase subunit 3. | Uncharacterized protein. | 0.991 |
PTT_07734 | cyn1 | E3RIA6 | E3RSA7 | Signal peptidase subunit 3. | Cyanate hydratase; Catalyzes the reaction of cyanate with bicarbonate to produce ammonia and carbon dioxide; Belongs to the cyanase family. | 0.952 |
PTT_07734 | sec11 | E3RIA6 | E3RR70 | Signal peptidase subunit 3. | Signal peptidase complex catalytic subunit sec11; Catalytic component of the signal peptidase complex (SPC), which catalyzes the cleavage of N-terminal signal sequences of proteins targeted to the endoplasmic reticulum. Signal peptide cleavage occurs during the translocation (cotranslationally or post-translationally) through the translocon pore into the endoplasmic reticulum (By similarity). | 0.975 |
PTT_10042 | PTT_15050 | E3RNA2 | E3RZH2 | E2_bind domain-containing protein. | UBIQUITIN_CONJUGAT_2 domain-containing protein. | 0.491 |
PTT_10042 | sec11 | E3RNA2 | E3RR70 | E2_bind domain-containing protein. | Signal peptidase complex catalytic subunit sec11; Catalytic component of the signal peptidase complex (SPC), which catalyzes the cleavage of N-terminal signal sequences of proteins targeted to the endoplasmic reticulum. Signal peptide cleavage occurs during the translocation (cotranslationally or post-translationally) through the translocon pore into the endoplasmic reticulum (By similarity). | 0.528 |
PTT_10941 | sec11 | E3RQF1 | E3RR70 | MIT domain-containing protein. | Signal peptidase complex catalytic subunit sec11; Catalytic component of the signal peptidase complex (SPC), which catalyzes the cleavage of N-terminal signal sequences of proteins targeted to the endoplasmic reticulum. Signal peptide cleavage occurs during the translocation (cotranslationally or post-translationally) through the translocon pore into the endoplasmic reticulum (By similarity). | 0.495 |
PTT_14527 | PTT_15582 | E3RYC7 | E3S0J7 | WD_REPEATS_REGION domain-containing protein. | WD_REPEATS_REGION domain-containing protein. | 0.999 |
PTT_14527 | PTT_19376 | E3RYC7 | E3S8Q5 | WD_REPEATS_REGION domain-containing protein. | DEP domain-containing protein. | 0.998 |
PTT_14527 | sec11 | E3RYC7 | E3RR70 | WD_REPEATS_REGION domain-containing protein. | Signal peptidase complex catalytic subunit sec11; Catalytic component of the signal peptidase complex (SPC), which catalyzes the cleavage of N-terminal signal sequences of proteins targeted to the endoplasmic reticulum. Signal peptide cleavage occurs during the translocation (cotranslationally or post-translationally) through the translocon pore into the endoplasmic reticulum (By similarity). | 0.523 |
PTT_15050 | PTT_10042 | E3RZH2 | E3RNA2 | UBIQUITIN_CONJUGAT_2 domain-containing protein. | E2_bind domain-containing protein. | 0.491 |
PTT_15050 | sec11 | E3RZH2 | E3RR70 | UBIQUITIN_CONJUGAT_2 domain-containing protein. | Signal peptidase complex catalytic subunit sec11; Catalytic component of the signal peptidase complex (SPC), which catalyzes the cleavage of N-terminal signal sequences of proteins targeted to the endoplasmic reticulum. Signal peptide cleavage occurs during the translocation (cotranslationally or post-translationally) through the translocon pore into the endoplasmic reticulum (By similarity). | 0.574 |
PTT_15582 | PTT_14527 | E3S0J7 | E3RYC7 | WD_REPEATS_REGION domain-containing protein. | WD_REPEATS_REGION domain-containing protein. | 0.999 |
PTT_15582 | PTT_19376 | E3S0J7 | E3S8Q5 | WD_REPEATS_REGION domain-containing protein. | DEP domain-containing protein. | 0.998 |
PTT_15582 | sec11 | E3S0J7 | E3RR70 | WD_REPEATS_REGION domain-containing protein. | Signal peptidase complex catalytic subunit sec11; Catalytic component of the signal peptidase complex (SPC), which catalyzes the cleavage of N-terminal signal sequences of proteins targeted to the endoplasmic reticulum. Signal peptide cleavage occurs during the translocation (cotranslationally or post-translationally) through the translocon pore into the endoplasmic reticulum (By similarity). | 0.514 |
PTT_16967 | PTT_06244 | E3S3D3 | E3RFF9 | Uncharacterized protein. | Uncharacterized protein. | 0.996 |
PTT_16967 | PTT_07734 | E3S3D3 | E3RIA6 | Uncharacterized protein. | Signal peptidase subunit 3. | 0.991 |
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