Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
PTT_00390 | lap1 | E3RCG3 | E3S6P9 | Neutral protease 2; Secreted metalloproteinase that allows assimilation of proteinaceous substrates. Shows high activities on basic nuclear substrates such as histone and protamine. Belongs to the peptidase M35 family. | Leucine aminopeptidase 1; Extracellular aminopeptidase that allows assimilation of proteinaceous substrates; Belongs to the peptidase M28 family. M28E subfamily. | 0.451 |
PTT_04449 | lap1 | E3REH5 | E3S6P9 | HAD_SAK_1 domain-containing protein. | Leucine aminopeptidase 1; Extracellular aminopeptidase that allows assimilation of proteinaceous substrates; Belongs to the peptidase M28 family. M28E subfamily. | 0.442 |
PTT_04468 | lap1 | E3REI7 | E3S6P9 | Uncharacterized protein. | Leucine aminopeptidase 1; Extracellular aminopeptidase that allows assimilation of proteinaceous substrates; Belongs to the peptidase M28 family. M28E subfamily. | 0.440 |
lap1 | PTT_00390 | E3S6P9 | E3RCG3 | Leucine aminopeptidase 1; Extracellular aminopeptidase that allows assimilation of proteinaceous substrates; Belongs to the peptidase M28 family. M28E subfamily. | Neutral protease 2; Secreted metalloproteinase that allows assimilation of proteinaceous substrates. Shows high activities on basic nuclear substrates such as histone and protamine. Belongs to the peptidase M35 family. | 0.451 |
lap1 | PTT_04449 | E3S6P9 | E3REH5 | Leucine aminopeptidase 1; Extracellular aminopeptidase that allows assimilation of proteinaceous substrates; Belongs to the peptidase M28 family. M28E subfamily. | HAD_SAK_1 domain-containing protein. | 0.442 |
lap1 | PTT_04468 | E3S6P9 | E3REI7 | Leucine aminopeptidase 1; Extracellular aminopeptidase that allows assimilation of proteinaceous substrates; Belongs to the peptidase M28 family. M28E subfamily. | Uncharacterized protein. | 0.440 |