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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
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co-expression
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Score
GAQ94842.1Nucleotide-binding universal stress protein, UspA family. (139 aa)    
Predicted Functional Partners:
GAQ94841.1
Nucleoside-diphosphate-sugar epimerase.
       0.746
GAQ95698.1
Nucleotide-binding universal stress protein, UspA family.
  
     0.685
der
GTP-binding protein; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family.
       0.670
GAQ94837.1
Hypothetical protein.
       0.651
GAQ94838.1
Two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY.
       0.651
GAQ94839.1
Two-component system, NtrC family, nitrogen regulation response regulator NtrX.
       0.651
GAQ94836.1
Hypothetical protein.
       0.472
murI
Glutamate racemase; Provides the (R)-glutamate required for cell wall biosynthesis.
  
    0.408
GAQ94830.1
Hypothetical protein.
       0.404
rph
Ribonuclease PH; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation.
       0.404
Your Current Organism:
Thermodesulfovibrio aggregans
NCBI taxonomy Id: 86166
Other names: DSM 17283, JCM 13213, T. aggregans, Thermodesulfovibrio aggregans Sekiguchi et al. 2008, Thermodesulfovibrio sp. TGE-P1, strain TGE-P1
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