Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
GAQ94854.1Hydrogenase maturation protease. (146 aa)    
Predicted Functional Partners:
GAQ94851.1
F420-non-reducing hydrogenase small subunit.
 
 
 0.910
GAQ94853.1
F420-non-reducing hydrogenase large subunit.
 
  
 0.876
GAQ94852.1
F420-non-reducing hydrogenase large subunit.
 
  
 0.841
GAQ94649.1
[NiFe] hydrogenase large subunit/hydrogenase large subunit; Belongs to the [NiFe]/[NiFeSe] hydrogenase large subunit family.
 
 
 0.751
GAQ94849.1
Heterodisulfide reductase subunit B.
 
     0.699
GAQ94850.1
F420-non-reducing hydrogenase iron-sulfur subunit.
 
    0.694
GAQ94848.1
Heterodisulfide reductase subunit C.
 
     0.680
GAQ94847.1
Heterodisulfide reductase subunit A.
 
    0.645
GAQ94648.1
Hydrogenase small subunit.
 
  
 0.561
GAQ94650.1
Hydrogenase maturation protease.
  
     0.549
Your Current Organism:
Thermodesulfovibrio aggregans
NCBI taxonomy Id: 86166
Other names: DSM 17283, JCM 13213, T. aggregans, Thermodesulfovibrio aggregans Sekiguchi et al. 2008, Thermodesulfovibrio sp. TGE-P1, strain TGE-P1
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