Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
GAQ94876.1MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG. (403 aa)    
Predicted Functional Partners:
GAQ94877.1
beta-N-acetylhexosaminidase.
     
 0.794
GAQ94726.1
Chorismate mutase.
   
 
 0.718
GAQ94883.1
Fe-S-cluster-containing dehydrogenase component.
    
  0.512
GAQ94710.1
NADPH-dependent glutamate synthase beta chain.
     
 0.449
GAQ94878.1
Hypothetical protein.
       0.447
GAQ94884.1
Undecaprenyl-diphosphatase.
     
 0.428
GAQ95697.1
Outer membrane protein, multidrug efflux system.
  
 
 0.428
GAQ94880.1
Nucleoside-diphosphate-sugar epimerase.
     
 0.421
GAQ94879.1
8-amino-7-oxononanoate synthase.
       0.420
GAQ94881.1
Membrane-bound serine protease.
       0.420
Your Current Organism:
Thermodesulfovibrio aggregans
NCBI taxonomy Id: 86166
Other names: DSM 17283, JCM 13213, T. aggregans, Thermodesulfovibrio aggregans Sekiguchi et al. 2008, Thermodesulfovibrio sp. TGE-P1, strain TGE-P1
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