Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
GAQ94878.1Hypothetical protein. (276 aa)    
Predicted Functional Partners:
GAQ94877.1
beta-N-acetylhexosaminidase.
  
  
 0.736
GAQ94879.1
8-amino-7-oxononanoate synthase.
       0.718
GAQ94880.1
Nucleoside-diphosphate-sugar epimerase.
       0.718
GAQ94881.1
Membrane-bound serine protease.
       0.718
GAQ94882.1
Aldehyde:ferredoxin oxidoreductase.
       0.718
GAQ94883.1
Fe-S-cluster-containing dehydrogenase component.
       0.718
GAQ94689.1
Hypothetical protein.
    
 0.707
GAQ95646.1
Hypothetical protein.
  
     0.693
GAQ95471.1
Hypothetical protein.
  
     0.689
GAQ94758.1
Hypothetical protein.
  
  
  0.675
Your Current Organism:
Thermodesulfovibrio aggregans
NCBI taxonomy Id: 86166
Other names: DSM 17283, JCM 13213, T. aggregans, Thermodesulfovibrio aggregans Sekiguchi et al. 2008, Thermodesulfovibrio sp. TGE-P1, strain TGE-P1
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