STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAQ93946.1Anaerobic selenocysteine-containing dehydrogenase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. (684 aa)    
Predicted Functional Partners:
GAQ94332.1
Quinone-modifying oxidoreductase subunit QmoB.
   
 0.973
GAQ94710.1
NADPH-dependent glutamate synthase beta chain.
 
 0.969
GAQ94340.1
Cytochrome c2.
  
 0.938
GAQ94922.1
Ni/Fe-hydrogenase 2 integral membrane subunit HybB.
  
 0.882
GAQ94301.1
Prokaryotic molybdopterin-containing oxidoreductase family, membrane subunit.
  
 0.882
GAQ93942.1
2-oxoglutarate ferredoxin oxidoreductase subunit alpha.
  
 
 0.815
GAQ93945.1
Methyltransferase domain-containing protein.
     0.813
GAQ95354.1
Cytochrome c nitrite reductase small subunit.
  
 0.806
GAQ94711.1
Tat (twin-arginine translocation) pathway signal sequence.
  
  0.800
msrB
Peptide methionine sulfoxide reductase msrA/msrB; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
     
 0.791
Your Current Organism:
Thermodesulfovibrio aggregans
NCBI taxonomy Id: 86166
Other names: DSM 17283, JCM 13213, T. aggregans, Thermodesulfovibrio aggregans Sekiguchi et al. 2008, Thermodesulfovibrio sp. TGE-P1, strain TGE-P1
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