Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
GAQ95035.1Putative negative regulator of RcsB-dependent stress response. (200 aa)    
Predicted Functional Partners:
hisS
histidyl-tRNA synthetase.
  
    0.853
GAQ95034.1
Histidinol phosphatase.
       0.788
GAQ95030.1
ABC-type branched-chain amino acid transport system, substrate-binding protein.
       0.780
GAQ95031.1
PAS domain S-box-containing protein.
       0.780
GAQ95032.1
Response regulator receiver domain-containing protein.
       0.780
GAQ95033.1
Nicotinamidase-related amidase.
       0.780
GAQ95028.1
Heterodisulfide reductase subunit A.
       0.773
GAQ95029.1
TusA-related sulfurtransferase; Belongs to the sulfur carrier protein TusA family.
       0.773
GAQ95027.1
2-oxoglutarate ferredoxin oxidoreductase subunit delta.
  
    0.619
GAQ95026.1
Hypothetical protein.
       0.462
Your Current Organism:
Thermodesulfovibrio aggregans
NCBI taxonomy Id: 86166
Other names: DSM 17283, JCM 13213, T. aggregans, Thermodesulfovibrio aggregans Sekiguchi et al. 2008, Thermodesulfovibrio sp. TGE-P1, strain TGE-P1
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