STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TAGGR_116Response regulator receiver domain-containing protein. (139 aa)    
Predicted Functional Partners:
TAGGR_115
PAS domain S-box-containing protein.
 
 0.958
GAQ95751.1
PAS domain S-box-containing protein.
 
 
 0.957
GAQ95047.1
Response regulator receiver domain-containing protein.
 
 0.956
GAQ94451.1
Two-component system, sensor histidine kinase FlrB.
 
 0.928
GAQ94873.1
Signal transduction histidine kinase.
 
 0.913
GAQ95046.1
PAS domain S-box-containing protein.
 
 0.911
GAQ94653.1
PAS domain S-box-containing protein.
 
 
 0.886
TAGGR_12
PAS domain S-box-containing protein.
 
 
 0.884
GAQ95291.1
PAS domain S-box-containing protein.
  
 0.881
fliP
Flagellar biosynthetic protein FliP; Plays a role in the flagellum-specific transport system. Belongs to the FliP/MopC/SpaP family.
  
  
 0.860
Your Current Organism:
Thermodesulfovibrio aggregans
NCBI taxonomy Id: 86166
Other names: DSM 17283, JCM 13213, T. aggregans, Thermodesulfovibrio aggregans Sekiguchi et al. 2008, Thermodesulfovibrio sp. TGE-P1, strain TGE-P1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.