STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TAGGR_119CBS domain-containing protein. (173 aa)    
Predicted Functional Partners:
TAGGR_120
Solute carrier family 13 protein.
 
     0.919
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
  
 
 0.896
TAGGR_121
Hypothetical protein.
 
     0.831
guaB
IMP dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.
     
 0.827
TAGGR_122
Na+/H+ antiporter NhaD.
 
     0.807
TAGGR_123
Nucleotide-binding universal stress protein, UspA family.
 
     0.755
GAQ94294.1
Hypothetical protein.
  
     0.738
GAQ95436.1
Hypothetical protein.
  
     0.735
TAGGR_118
GntR family transcriptional regulator.
       0.725
GAQ94181.1
Hypothetical protein.
 
     0.708
Your Current Organism:
Thermodesulfovibrio aggregans
NCBI taxonomy Id: 86166
Other names: DSM 17283, JCM 13213, T. aggregans, Thermodesulfovibrio aggregans Sekiguchi et al. 2008, Thermodesulfovibrio sp. TGE-P1, strain TGE-P1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.