STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TAGGR_12PAS domain S-box-containing protein. (475 aa)    
Predicted Functional Partners:
GAQ95047.1
Response regulator receiver domain-containing protein.
 0.998
GAQ94873.1
Signal transduction histidine kinase.
 
0.997
GAQ95046.1
PAS domain S-box-containing protein.
 
0.995
GAQ94653.1
PAS domain S-box-containing protein.
 
0.995
GAQ95291.1
PAS domain S-box-containing protein.
 
 0.995
GAQ95684.1
Chemosensory pili system protein ChpA.
 
 0.993
GAQ94637.1
Response regulator receiver domain-containing protein.
 0.990
GAQ95751.1
PAS domain S-box-containing protein.
 
 
0.989
GAQ94875.1
Hypothetical protein.
 
0.988
GAQ94232.1
Two-component system, chemotaxis family, response regulator CheY.
 
 0.988
Your Current Organism:
Thermodesulfovibrio aggregans
NCBI taxonomy Id: 86166
Other names: DSM 17283, JCM 13213, T. aggregans, Thermodesulfovibrio aggregans Sekiguchi et al. 2008, Thermodesulfovibrio sp. TGE-P1, strain TGE-P1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.