Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
GAQ94084.1Chemotaxis protein MotB. (213 aa)    
Predicted Functional Partners:
GAQ94085.1
Chemotaxis protein MotA.
 
 0.999
GAQ94082.1
Chemotaxis protein MotA.
  
 0.993
GAQ94235.1
Chemotaxis protein CheZ.
  
  
 0.968
GAQ95684.1
Chemosensory pili system protein ChpA.
 
  
 0.939
GAQ94081.1
Chemotaxis protein MotB.
    
 
0.932
fliP
Flagellar biosynthetic protein FliP; Plays a role in the flagellum-specific transport system. Belongs to the FliP/MopC/SpaP family.
 
  
 0.929
flgK
Flagellar hook-associated protein 1 FlgK.
 
  
 0.900
GAQ94448.1
Flagellar basal-body rod protein FlgC; Belongs to the flagella basal body rod proteins family.
 
  
 0.887
GAQ94445.1
Flagellar motor switch protein FliG.
 
  
 0.866
GAQ94443.1
Flagellum-specific ATP synthase.
 
  
 0.863
Your Current Organism:
Thermodesulfovibrio aggregans
NCBI taxonomy Id: 86166
Other names: DSM 17283, JCM 13213, T. aggregans, Thermodesulfovibrio aggregans Sekiguchi et al. 2008, Thermodesulfovibrio sp. TGE-P1, strain TGE-P1
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