Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
GAQ94133.12,4-dienoyl-CoA reductase. (366 aa)    
Predicted Functional Partners:
TAGGR_374
Electron transfer flavoprotein beta subunit.
  
 0.921
TAGGR_373
Electron transfer flavoprotein alpha subunit.
   
 0.900
GAQ94710.1
NADPH-dependent glutamate synthase beta chain.
 
  
 0.884
GAQ94132.1
4-hydroxythreonine-4-phosphate dehydrogenase; Belongs to the PdxA family.
       0.780
tpiA
Triosephosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family.
  
 
 0.761
GAQ94129.1
Preprotein translocase subunit SecG; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family.
 
     0.735
GAQ93984.1
Dihydrolipoamide dehydrogenase.
 
 
 0.708
GAQ94131.1
Outer membrane lipoprotein carrier protein.
       0.688
GAQ94130.1
Peptide/nickel transport system substrate-binding protein.
       0.680
gatA
aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu- tRNA(Gln).
     
 0.638
Your Current Organism:
Thermodesulfovibrio aggregans
NCBI taxonomy Id: 86166
Other names: DSM 17283, JCM 13213, T. aggregans, Thermodesulfovibrio aggregans Sekiguchi et al. 2008, Thermodesulfovibrio sp. TGE-P1, strain TGE-P1
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