Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
TAGGR_147Succinate dehydrogenase. (577 aa)    
Predicted Functional Partners:
TAGGR_148
Succinate dehydrogenase; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family.
 
 0.999
TAGGR_149
Succinate dehydrogenase.
 
 0.998
TAGGR_150
Succinate dehydrogenase.
 
 0.997
GAQ94710.1
NADPH-dependent glutamate synthase beta chain.
  
 0.969
GAQ95022.1
Cytochrome b6-f complex iron-sulfur subunit.
 
 0.967
GAQ95721.1
Fumarate hydratase subunit beta.
  
 
 0.884
GAQ95723.1
Fumarate hydratase subunit alpha.
  
 
 0.884
GAQ94175.1
Pyruvate carboxylase subunit B.
    
 0.853
GAQ93942.1
2-oxoglutarate ferredoxin oxidoreductase subunit alpha.
   
 
 0.850
mdh
Malate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 3 family.
  
 0.846
Your Current Organism:
Thermodesulfovibrio aggregans
NCBI taxonomy Id: 86166
Other names: DSM 17283, JCM 13213, T. aggregans, Thermodesulfovibrio aggregans Sekiguchi et al. 2008, Thermodesulfovibrio sp. TGE-P1, strain TGE-P1
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