STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAQ94416.1Thioredoxin reductase. (330 aa)    
Predicted Functional Partners:
GAQ94743.1
Thioredoxin; Belongs to the thioredoxin family.
  
 0.958
TAGGR_195
Small redox-active disulfide protein 2.
   
 0.947
GAQ94710.1
NADPH-dependent glutamate synthase beta chain.
  
 
0.920
GAQ94415.1
Ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family.
  
 
 0.880
GAQ94623.1
Peroxiredoxin.
  
 
 0.813
GAQ94624.1
Peroxiredoxin.
  
 
 0.813
GAQ94732.1
Peroxiredoxin; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides.
  
 
 0.813
selD
Selenide, water dikinase; Synthesizes selenophosphate from selenide and ATP.
     
 0.789
GAQ94251.1
ADP-heptose:LPS heptosyltransferase.
  
 
 0.709
GAQ94709.1
Glutamate synthase (NADPH/NADH) large chain; Belongs to the glutamate synthase family.
    
 0.703
Your Current Organism:
Thermodesulfovibrio aggregans
NCBI taxonomy Id: 86166
Other names: DSM 17283, JCM 13213, T. aggregans, Thermodesulfovibrio aggregans Sekiguchi et al. 2008, Thermodesulfovibrio sp. TGE-P1, strain TGE-P1
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