Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
GAQ94481.1Sulfite reductase beta subunit. (371 aa)    
Predicted Functional Partners:
GAQ94480.1
Sulfite reductase alpha subunit.
 
  
 
0.971
GAQ94297.1
Nitrate reductase gamma subunit.
 
  
 0.941
GAQ94330.1
Adenylylsulfate reductase subunit A.
 
 
 0.937
GAQ94295.1
tRNA 2-thiouridine synthesizing protein E.
 
 
 
 0.935
GAQ94329.1
Adenylylsulfate reductase subunit B.
  
 
 0.935
GAQ94298.1
Fe-S oxidoreductase.
 
 
 0.934
GAQ94299.1
Hypothetical protein.
 
 
 0.925
GAQ93943.1
Sulfur relay protein, TusE/DsrC/DsvC family.
 
 
 
 0.919
GAQ94301.1
Prokaryotic molybdopterin-containing oxidoreductase family, membrane subunit.
 
  
 0.916
GAQ94710.1
NADPH-dependent glutamate synthase beta chain.
  
 
 0.837
Your Current Organism:
Thermodesulfovibrio aggregans
NCBI taxonomy Id: 86166
Other names: DSM 17283, JCM 13213, T. aggregans, Thermodesulfovibrio aggregans Sekiguchi et al. 2008, Thermodesulfovibrio sp. TGE-P1, strain TGE-P1
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