STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAQ94481.1Sulfite reductase beta subunit. (371 aa)    
Predicted Functional Partners:
GAQ94295.1
tRNA 2-thiouridine synthesizing protein E.
 
 
 
 0.980
GAQ93943.1
Sulfur relay protein, TusE/DsrC/DsvC family.
 
 
 
 0.972
GAQ94330.1
Adenylylsulfate reductase subunit A.
 
 
 0.957
GAQ94480.1
Sulfite reductase alpha subunit.
 
  
0.954
GAQ94329.1
Adenylylsulfate reductase subunit B.
  
 
 0.951
GAQ94710.1
NADPH-dependent glutamate synthase beta chain.
  
 
 0.863
GAQ94297.1
Nitrate reductase gamma subunit.
 
   
 0.824
GAQ94298.1
Fe-S oxidoreductase.
 
 
 0.824
GAQ95109.1
Fe-S oxidoreductase.
 
 
 0.817
GAQ93942.1
2-oxoglutarate ferredoxin oxidoreductase subunit alpha.
  
 
 0.780
Your Current Organism:
Thermodesulfovibrio aggregans
NCBI taxonomy Id: 86166
Other names: DSM 17283, JCM 13213, T. aggregans, Thermodesulfovibrio aggregans Sekiguchi et al. 2008, Thermodesulfovibrio sp. TGE-P1, strain TGE-P1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.