Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
GAQ94587.1Hypothetical protein. (280 aa)    
Predicted Functional Partners:
GAQ94591.1
O-antigen ligase.
  
 
 0.832
GAQ94590.1
ADP-heptose:LPS heptosyltransferase.
  
 
  0.809
GAQ94589.1
Spore maturation protein CgeB.
  
    0.785
GAQ94771.1
Mannose-1-phosphate guanylyltransferase; Belongs to the mannose-6-phosphate isomerase type 2 family.
  
 
 0.776
GAQ94585.1
Polysaccharide deacetylase.
     
 0.774
GAQ94583.1
Glycosyltransferase.
       0.773
GAQ94584.1
Glycosyltransferase.
       0.773
GAQ94586.1
Hypothetical protein.
       0.773
GAQ94588.1
Glycosyltransferase.
       0.773
GAQ94592.1
UDP-glucose:(heptosyl)LPS alpha-1,3-glucosyltransferase.
       0.773
Your Current Organism:
Thermodesulfovibrio aggregans
NCBI taxonomy Id: 86166
Other names: DSM 17283, JCM 13213, T. aggregans, Thermodesulfovibrio aggregans Sekiguchi et al. 2008, Thermodesulfovibrio sp. TGE-P1, strain TGE-P1
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