Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
GAQ94630.1Cellulose synthase subunit. (262 aa)    
Predicted Functional Partners:
GAQ94628.1
Cellulose synthase subunit.
 
 0.989
GAQ94631.1
Cellulose synthase.
 
     0.946
GAQ95291.1
PAS domain S-box-containing protein.
  
 
 0.893
GAQ94627.1
Endoglucanase.
 
 
 0.881
GAQ94771.1
Mannose-1-phosphate guanylyltransferase; Belongs to the mannose-6-phosphate isomerase type 2 family.
  
 
 0.836
GAQ94626.1
Cellulose synthase operon protein C C-terminus.
 
   
 0.775
GAQ94476.1
Chromosome partitioning protein.
  
 
 0.626
GAQ94679.1
Chromosome partitioning protein.
  
 
 0.626
GAQ94452.1
Tetratricopeptide repeat-containing protein.
  
 
 0.625
GAQ95260.1
Tetratricopeptide repeat-containing protein.
  
 
 0.625
Your Current Organism:
Thermodesulfovibrio aggregans
NCBI taxonomy Id: 86166
Other names: DSM 17283, JCM 13213, T. aggregans, Thermodesulfovibrio aggregans Sekiguchi et al. 2008, Thermodesulfovibrio sp. TGE-P1, strain TGE-P1
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