STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TAGGR_198Predicted DNA-binding protein with PD1-like DNA-binding motif. (144 aa)    
Predicted Functional Partners:
trpF
Phosphoribosylanthranilate isomerase; Belongs to the TrpF family.
       0.784
GAQ93935.1
Heptosyltransferase-2.
       0.782
TAGGR_196
Hypothetical protein.
       0.778
TAGGR_199
Heptosyltransferase-1.
       0.773
TAGGR_195
Small redox-active disulfide protein 2.
       0.657
TAGGR_194
Hypothetical protein.
 
     0.584
GAQ93936.1
Hypothetical protein.
       0.559
GAQ93937.1
Peptide/nickel transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
       0.559
GAQ94899.1
Diaminohydroxyphosphoribosylaminopyrimidine deaminase; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family.
      
 0.452
GAQ94672.1
Glutaredoxin.
  
     0.412
Your Current Organism:
Thermodesulfovibrio aggregans
NCBI taxonomy Id: 86166
Other names: DSM 17283, JCM 13213, T. aggregans, Thermodesulfovibrio aggregans Sekiguchi et al. 2008, Thermodesulfovibrio sp. TGE-P1, strain TGE-P1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.