STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cysCAdenylylsulfate kinase; Catalyzes the synthesis of activated sulfate. (203 aa)    
Predicted Functional Partners:
GAQ94327.1
Sulfate adenylyltransferase.
 
 0.998
TAGGR_110
Uroporphyrinogen III methyltransferase.
  
  
 0.904
tuf
Elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
 
      0.899
GAQ94710.1
NADPH-dependent glutamate synthase beta chain.
     
 0.877
TAGGR_212
Glycosyltransferase, GT2 family.
       0.804
TAGGR_186
Cysteine synthase B.
  
  
 0.803
GAQ94330.1
Adenylylsulfate reductase subunit A.
    
 0.798
TAGGR_211
Hypothetical protein.
  
 
 0.784
GAQ94329.1
Adenylylsulfate reductase subunit B.
    
 0.777
TAGGR_213
Glucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family.
  
    0.750
Your Current Organism:
Thermodesulfovibrio aggregans
NCBI taxonomy Id: 86166
Other names: DSM 17283, JCM 13213, T. aggregans, Thermodesulfovibrio aggregans Sekiguchi et al. 2008, Thermodesulfovibrio sp. TGE-P1, strain TGE-P1
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