Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
GAQ95245.1Predicted PurR-regulated permease PerM. (357 aa)    
Predicted Functional Partners:
GAQ95246.1
Putative glutamine amidotransferase.
       0.787
GAQ95249.1
Fe-S cluster biogenesis protein NfuA, 4Fe-4S-binding domain.
       0.785
GAQ95244.1
Peptide chain release factor subunit 1.
       0.780
GAQ95247.1
N-acyl-D-amino-acid deacylase.
       0.773
GAQ95248.1
N-acetylmuramoyl-L-alanine amidase.
       0.773
purE
5-(carboxyamino)imidazole ribonucleotide mutase; Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR).
    
  0.569
TAGGR_382
Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily.
    
  0.545
GAQ95250.1
Hypothetical protein.
       0.524
GAQ95251.1
Flagellin; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.
 
     0.438
TAGGR_183
Ca2+-transporting ATPase.
 
    0.401
Your Current Organism:
Thermodesulfovibrio aggregans
NCBI taxonomy Id: 86166
Other names: DSM 17283, JCM 13213, T. aggregans, Thermodesulfovibrio aggregans Sekiguchi et al. 2008, Thermodesulfovibrio sp. TGE-P1, strain TGE-P1
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