Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
GAQ95247.1N-acyl-D-amino-acid deacylase. (517 aa)    
Predicted Functional Partners:
GAQ95246.1
Putative glutamine amidotransferase.
       0.798
GAQ95248.1
N-acetylmuramoyl-L-alanine amidase.
       0.774
GAQ95244.1
Peptide chain release factor subunit 1.
       0.773
GAQ95245.1
Predicted PurR-regulated permease PerM.
       0.773
GAQ95249.1
Fe-S cluster biogenesis protein NfuA, 4Fe-4S-binding domain.
       0.773
pyrC
Dihydroorotase; Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate; Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily.
    
  0.594
pyrD
Dihydroorotate dehydrogenase (NAD+) catalytic subunit; Catalyzes the conversion of dihydroorotate to orotate.
    
  0.585
pyrB
Aspartate carbamoyltransferase catalytic subunit; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family.
    
  0.571
GAQ94877.1
beta-N-acetylhexosaminidase.
     
  0.535
GAQ95250.1
Hypothetical protein.
       0.524
Your Current Organism:
Thermodesulfovibrio aggregans
NCBI taxonomy Id: 86166
Other names: DSM 17283, JCM 13213, T. aggregans, Thermodesulfovibrio aggregans Sekiguchi et al. 2008, Thermodesulfovibrio sp. TGE-P1, strain TGE-P1
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