Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
GAQ95249.1Fe-S cluster biogenesis protein NfuA, 4Fe-4S-binding domain. (74 aa)    
Predicted Functional Partners:
lipA
Lipoic acid synthetase; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives.
   
 0.912
TAGGR_148
Succinate dehydrogenase; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family.
  
 
 0.910
GAQ95419.1
Iron-sulfur cluster insertion protein; Belongs to the HesB/IscA family.
  
 
 0.884
TAGGR_173
Cysteine desulfurase.
 
 
 0.853
GAQ95245.1
Predicted PurR-regulated permease PerM.
       0.785
GAQ95248.1
N-acetylmuramoyl-L-alanine amidase.
       0.780
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
  
 
 0.774
GAQ95244.1
Peptide chain release factor subunit 1.
       0.773
GAQ95246.1
Putative glutamine amidotransferase.
       0.773
GAQ95247.1
N-acyl-D-amino-acid deacylase.
       0.773
Your Current Organism:
Thermodesulfovibrio aggregans
NCBI taxonomy Id: 86166
Other names: DSM 17283, JCM 13213, T. aggregans, Thermodesulfovibrio aggregans Sekiguchi et al. 2008, Thermodesulfovibrio sp. TGE-P1, strain TGE-P1
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