Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
GAQ95287.1Hypothetical protein. (345 aa)    
Predicted Functional Partners:
TAGGR_177
Cytochrome d ubiquinol oxidase subunit II.
  
 0.953
GAQ95288.1
Hypothetical protein.
 
     0.947
GAQ95295.1
Putative zinc- or iron-chelating domain-containing protein.
 
     0.643
GAQ94441.1
Hypothetical protein.
  
     0.598
GAQ94605.1
Putative metalloenzyme radical SAM/SPASM domain maturase.
  
     0.588
GAQ95289.1
Metallo-beta-lactamase superfamily protein.
       0.574
GAQ95291.1
PAS domain S-box-containing protein.
       0.537
GAQ95236.1
Zinc dependent phospholipase C.
  
     0.528
tal
Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 3B subfamily.
  
    0.508
GAQ95293.1
Ribonuclease G.
       0.507
Your Current Organism:
Thermodesulfovibrio aggregans
NCBI taxonomy Id: 86166
Other names: DSM 17283, JCM 13213, T. aggregans, Thermodesulfovibrio aggregans Sekiguchi et al. 2008, Thermodesulfovibrio sp. TGE-P1, strain TGE-P1
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