STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAQ95287.1Hypothetical protein. (345 aa)    
Predicted Functional Partners:
TAGGR_177
Cytochrome d ubiquinol oxidase subunit II.
  
 
 0.984
GAQ95288.1
Hypothetical protein.
 
     0.947
GAQ95295.1
Putative zinc- or iron-chelating domain-containing protein.
 
     0.643
GAQ94441.1
Hypothetical protein.
  
     0.598
GAQ94605.1
Putative metalloenzyme radical SAM/SPASM domain maturase.
  
     0.588
GAQ95289.1
Metallo-beta-lactamase superfamily protein.
       0.575
tal
Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 3B subfamily.
  
  
 0.566
GAQ95291.1
PAS domain S-box-containing protein.
       0.559
GAQ94710.1
NADPH-dependent glutamate synthase beta chain.
  
   
 0.536
GAQ95236.1
Zinc dependent phospholipase C.
  
     0.528
Your Current Organism:
Thermodesulfovibrio aggregans
NCBI taxonomy Id: 86166
Other names: DSM 17283, JCM 13213, T. aggregans, Thermodesulfovibrio aggregans Sekiguchi et al. 2008, Thermodesulfovibrio sp. TGE-P1, strain TGE-P1
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.