Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
GAQ95297.1Serine protease Do. (485 aa)    
Predicted Functional Partners:
GAQ94990.1
PDZ domain-containing protein.
  
  
 
0.782
GAQ95291.1
PAS domain S-box-containing protein.
     
 0.753
GAQ95292.1
Radical SAM-linked protein/radical SAM family uncharacterized protein.
  
    0.745
GAQ95293.1
Ribonuclease G.
     
 0.743
tal
Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 3B subfamily.
       0.734
GAQ95290.1
Methyl-accepting chemotaxis protein.
       0.727
GAQ95294.1
Glycolate oxidase iron-sulfur subunit.
       0.727
GAQ95295.1
Putative zinc- or iron-chelating domain-containing protein.
       0.727
GAQ95358.1
Tetratricopeptide repeat-containing protein.
   
 0.724
TAGGR_282
Serine protease Do.
     
  0.718
Your Current Organism:
Thermodesulfovibrio aggregans
NCBI taxonomy Id: 86166
Other names: DSM 17283, JCM 13213, T. aggregans, Thermodesulfovibrio aggregans Sekiguchi et al. 2008, Thermodesulfovibrio sp. TGE-P1, strain TGE-P1
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