Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
GAQ95388.1Sulfite exporter TauE/SafE. (422 aa)    
Predicted Functional Partners:
GAQ95387.1
Hypothetical protein.
 
     0.939
GAQ95386.1
Thiosulfate reductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
     0.792
GAQ95389.1
Nucleotide-binding universal stress protein, UspA family.
       0.758
GAQ95385.1
DMSO reductase, iron-sulfur subunit.
       0.728
GAQ95320.1
Conserved hypothetical protein 698.
 
   
 0.718
GAQ94699.1
Tetratricopeptide repeat-containing protein.
  
     0.653
GAQ94734.1
Porin; Belongs to the OprB family.
  
     0.649
GAQ94914.1
Porin; Belongs to the OprB family.
  
     0.626
TAGGR_137
Hypothetical protein.
  
     0.622
GAQ94294.1
Hypothetical protein.
  
     0.583
Your Current Organism:
Thermodesulfovibrio aggregans
NCBI taxonomy Id: 86166
Other names: DSM 17283, JCM 13213, T. aggregans, Thermodesulfovibrio aggregans Sekiguchi et al. 2008, Thermodesulfovibrio sp. TGE-P1, strain TGE-P1
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