Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
GAQ95404.1HDIG domain-containing protein. (397 aa)    
Predicted Functional Partners:
GAQ95291.1
PAS domain S-box-containing protein.
 
 0.798
GAQ95403.1
Glyoxylase, beta-lactamase superfamily II.
       0.773
ribBA
3,4-dihydroxy 2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.
     
  0.735
GAQ95223.1
Diguanylate cyclase (GGDEF) domain-containing protein.
 
 
 
 0.692
GAQ95423.1
Diguanylate cyclase (GGDEF) domain-containing protein.
 
 
   0.678
GAQ94913.1
Diguanylate cyclase (GGDEF) domain-containing protein.
  
 
 
 0.673
GAQ94656.1
Diguanylate cyclase (GGDEF) domain-containing protein.
 
 
   0.673
GAQ95727.1
Diguanylate cyclase (GGDEF) domain-containing protein.
  
 
   0.667
GAQ94406.1
PAS domain S-box-containing protein.
  
 
 
 0.662
GAQ94681.1
Adenylate cyclase.
 
  
  0.628
Your Current Organism:
Thermodesulfovibrio aggregans
NCBI taxonomy Id: 86166
Other names: DSM 17283, JCM 13213, T. aggregans, Thermodesulfovibrio aggregans Sekiguchi et al. 2008, Thermodesulfovibrio sp. TGE-P1, strain TGE-P1
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