Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
GAQ95471.1Hypothetical protein. (265 aa)    
Predicted Functional Partners:
GAQ95450.1
Hypothetical protein.
  
     0.703
GAQ94878.1
Hypothetical protein.
  
     0.689
GAQ94907.1
Hypothetical protein.
  
     0.685
GAQ95703.1
Hypothetical protein.
  
     0.684
GAQ95281.1
Hypothetical protein.
  
     0.678
GAQ94758.1
Hypothetical protein.
  
     0.667
GAQ95250.1
Hypothetical protein.
  
     0.642
GAQ94512.1
Hypothetical protein.
  
     0.634
GAQ95472.1
Hypothetical protein.
       0.547
GAQ95473.1
Type IV pilus assembly protein PilY1.
       0.547
Your Current Organism:
Thermodesulfovibrio aggregans
NCBI taxonomy Id: 86166
Other names: DSM 17283, JCM 13213, T. aggregans, Thermodesulfovibrio aggregans Sekiguchi et al. 2008, Thermodesulfovibrio sp. TGE-P1, strain TGE-P1
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