Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| GAQ94467.1 | xerD | TAGGR_1648 | TAGGR_248 | DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family. | Integrase/recombinase XerD; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids. | 0.417 |
| TAGGR_193 | TAGGR_287 | TAGGR_193 | TAGGR_287 | comF family protein. | Phage integrase family protein. | 0.431 |
| TAGGR_193 | xerD | TAGGR_193 | TAGGR_248 | comF family protein. | Integrase/recombinase XerD; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids. | 0.431 |
| TAGGR_249 | TAGGR_250 | TAGGR_249 | TAGGR_250 | Hypothetical protein. | Murein DD-endopeptidase MepM and murein hydrolase activator NlpD. | 0.537 |
| TAGGR_249 | TAGGR_251 | TAGGR_249 | TAGGR_251 | Hypothetical protein. | Protein CcmA, bactofilin family. | 0.537 |
| TAGGR_249 | xerD | TAGGR_249 | TAGGR_248 | Hypothetical protein. | Integrase/recombinase XerD; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids. | 0.784 |
| TAGGR_250 | TAGGR_249 | TAGGR_250 | TAGGR_249 | Murein DD-endopeptidase MepM and murein hydrolase activator NlpD. | Hypothetical protein. | 0.537 |
| TAGGR_250 | TAGGR_251 | TAGGR_250 | TAGGR_251 | Murein DD-endopeptidase MepM and murein hydrolase activator NlpD. | Protein CcmA, bactofilin family. | 0.848 |
| TAGGR_250 | xerD | TAGGR_250 | TAGGR_248 | Murein DD-endopeptidase MepM and murein hydrolase activator NlpD. | Integrase/recombinase XerD; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids. | 0.563 |
| TAGGR_251 | TAGGR_249 | TAGGR_251 | TAGGR_249 | Protein CcmA, bactofilin family. | Hypothetical protein. | 0.537 |
| TAGGR_251 | TAGGR_250 | TAGGR_251 | TAGGR_250 | Protein CcmA, bactofilin family. | Murein DD-endopeptidase MepM and murein hydrolase activator NlpD. | 0.848 |
| TAGGR_251 | xerD | TAGGR_251 | TAGGR_248 | Protein CcmA, bactofilin family. | Integrase/recombinase XerD; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids. | 0.537 |
| TAGGR_287 | TAGGR_193 | TAGGR_287 | TAGGR_193 | Phage integrase family protein. | comF family protein. | 0.431 |
| TAGGR_287 | xerD | TAGGR_287 | TAGGR_248 | Phage integrase family protein. | Integrase/recombinase XerD; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids. | 0.662 |
| recR | xerD | TAGGR_1241 | TAGGR_248 | Recombination protein RecR; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO. | Integrase/recombinase XerD; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids. | 0.462 |
| xerD | GAQ94467.1 | TAGGR_248 | TAGGR_1648 | Integrase/recombinase XerD; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids. | DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family. | 0.417 |
| xerD | TAGGR_193 | TAGGR_248 | TAGGR_193 | Integrase/recombinase XerD; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids. | comF family protein. | 0.431 |
| xerD | TAGGR_249 | TAGGR_248 | TAGGR_249 | Integrase/recombinase XerD; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids. | Hypothetical protein. | 0.784 |
| xerD | TAGGR_250 | TAGGR_248 | TAGGR_250 | Integrase/recombinase XerD; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids. | Murein DD-endopeptidase MepM and murein hydrolase activator NlpD. | 0.563 |
| xerD | TAGGR_251 | TAGGR_248 | TAGGR_251 | Integrase/recombinase XerD; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids. | Protein CcmA, bactofilin family. | 0.537 |
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