Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TAGGR_260Hypothetical protein. (142 aa)    
Predicted Functional Partners:
TAGGR_259
Arsenite transporter, ACR3 family.
       0.777
TAGGR_261
Hypothetical protein.
       0.773
GAQ94710.1
NADPH-dependent glutamate synthase beta chain.
    
  0.772
GAQ94692.1
Tetratricopeptide repeat-containing protein.
  
     0.616
GAQ95335.1
Hypothetical protein.
  
     0.514
GAQ95644.1
Hypothetical protein.
  
     0.483
GAQ94452.1
Tetratricopeptide repeat-containing protein.
  
     0.428
GAQ94083.1
PilZ domain-containing protein.
  
     0.420
GAQ95428.1
Hypothetical protein.
  
     0.420
GAQ94059.1
Doubled CXXCH domain-containing protein.
  
     0.415
Your Current Organism:
Thermodesulfovibrio aggregans
NCBI taxonomy Id: 86166
Other names: DSM 17283, JCM 13213, T. aggregans, Thermodesulfovibrio aggregans Sekiguchi et al. 2008, Thermodesulfovibrio sp. TGE-P1, strain TGE-P1
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