Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
GAQ95648.1Type IV pilus assembly protein PilM. (311 aa)    
Predicted Functional Partners:
GAQ95649.1
Type IV pilus assembly protein PilN.
 
 0.998
GAQ95652.1
Type IV pilus assembly protein PilQ.
 
 
 0.989
GAQ95650.1
Type IV pilus assembly protein PilO.
 
 
 0.986
GAQ95651.1
Type IV pilus assembly protein PilP.
 
  
 0.911
TAGGR_151
Type IV pilus assembly protein PilC.
 
 
 
 0.844
GAQ95655.1
Type IV pilus assembly protein PilA.
 
  
 0.788
GAQ95653.1
DNA-binding response regulator, OmpR family.
     
 0.782
GAQ95654.1
Hypothetical protein.
     
 0.781
GAQ95300.1
General secretion pathway protein F.
 
 
 
 0.736
aroE
Shikimate dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA).
       0.729
Your Current Organism:
Thermodesulfovibrio aggregans
NCBI taxonomy Id: 86166
Other names: DSM 17283, JCM 13213, T. aggregans, Thermodesulfovibrio aggregans Sekiguchi et al. 2008, Thermodesulfovibrio sp. TGE-P1, strain TGE-P1
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.