Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
GAQ95708.1HlyD family secretion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (316 aa)    
Predicted Functional Partners:
GAQ95707.1
ABC-2 type transport system ATP-binding protein.
 
    0.947
GAQ94593.1
Putative ABC transport system permease protein.
 
  
 0.893
GAQ94596.1
Outer membrane protein TolC.
 
 0.809
GAQ95704.1
ABC-2 type transport system permease protein.
 
  
 0.799
GAQ95697.1
Outer membrane protein, multidrug efflux system.
 
 0.789
GAQ95702.1
ABC-2 type transport system permease protein.
 
  
 0.774
GAQ94598.1
Outer membrane protein.
 
 0.770
GAQ94976.1
Outer membrane protein TolC.
 
 0.769
GAQ95709.1
Diguanylate cyclase (GGDEF) domain-containing protein.
       0.727
GAQ95696.1
Hydrophobic/amphiphilic exporter-1, HAE1 family; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
  
 0.542
Your Current Organism:
Thermodesulfovibrio aggregans
NCBI taxonomy Id: 86166
Other names: DSM 17283, JCM 13213, T. aggregans, Thermodesulfovibrio aggregans Sekiguchi et al. 2008, Thermodesulfovibrio sp. TGE-P1, strain TGE-P1
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