Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
GAQ95755.1Two-component system, NtrC family, sensor histidine kinase HydH. (372 aa)    
Predicted Functional Partners:
GAQ95047.1
Response regulator receiver domain-containing protein.
 
 
 0.942
GAQ94873.1
Signal transduction histidine kinase.
 
 
0.932
GAQ95751.1
PAS domain S-box-containing protein.
 
 
0.918
GAQ94653.1
PAS domain S-box-containing protein.
 
 
0.910
GAQ95046.1
PAS domain S-box-containing protein.
   
 0.881
GAQ95750.1
Response regulator receiver domain-containing protein.
 
 
 0.860
GAQ95756.1
DNA-binding transcriptional response regulator, NtrC family.
 
 
  0.859
GAQ95682.1
Twitching motility two-component system response regulator PilH.
  
 
 0.844
GAQ94232.1
Two-component system, chemotaxis family, response regulator CheY.
  
 
 0.843
GAQ95032.1
Response regulator receiver domain-containing protein.
  
 
 0.842
Your Current Organism:
Thermodesulfovibrio aggregans
NCBI taxonomy Id: 86166
Other names: DSM 17283, JCM 13213, T. aggregans, Thermodesulfovibrio aggregans Sekiguchi et al. 2008, Thermodesulfovibrio sp. TGE-P1, strain TGE-P1
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