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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TAGGR_324Nitrogen fixation protein NifB. (294 aa)    
Predicted Functional Partners:
TAGGR_319
Nitrogenase molybdenum-iron protein beta chain; This molybdenum-iron protein is part of the nitrogenase complex that catalyzes the key enzymatic reactions in nitrogen fixation; Belongs to the NifD/NifK/NifE/NifN family.
  
 0.993
TAGGR_320
Nitrogenase molybdenum-cofactor synthesis protein NifE.
  
 0.952
TAGGR_318
Nitrogenase molybdenum-iron protein alpha chain; Belongs to the NifD/NifK/NifE/NifN family.
 
  
 0.949
nifH
Nitrogenase iron protein NifH; The key enzymatic reactions in nitrogen fixation are catalyzed by the nitrogenase complex, which has 2 components: the iron protein and the molybdenum-iron protein; Belongs to the NifH/BchL/ChlL family.
 
  
 0.947
TAGGR_321
Nitrogen fixation protein NifX.
 
  
 0.946
TAGGR_322
Nitrogen regulatory protein PII 1; Belongs to the P(II) protein family.
 
  
 0.816
TAGGR_323
Nitrogen regulatory protein PII 2; Belongs to the P(II) protein family.
  
  
 0.791
ribBA
3,4-dihydroxy 2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.
    
  0.705
GAQ95291.1
PAS domain S-box-containing protein.
  
 
 0.609
GAQ95047.1
Response regulator receiver domain-containing protein.
     
 0.411
Your Current Organism:
Thermodesulfovibrio aggregans
NCBI taxonomy Id: 86166
Other names: DSM 17283, JCM 13213, T. aggregans, Thermodesulfovibrio aggregans Sekiguchi et al. 2008, Thermodesulfovibrio sp. TGE-P1, strain TGE-P1
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