Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TAGGR_348Geranylgeranyl reductase. (379 aa)    
Predicted Functional Partners:
TAGGR_374
Electron transfer flavoprotein beta subunit.
  
 
 0.871
TAGGR_373
Electron transfer flavoprotein alpha subunit.
  
 
 0.866
GAQ95309.1
Geranylgeranyl diphosphate synthase, type II; Belongs to the FPP/GGPP synthase family.
 
 0.808
GAQ94103.1
Phytoene dehydrogenase-related protein.
 
 
 0.802
GAQ95503.1
Iron-sulfur cluster-binding protein.
    
  0.793
GAQ93979.1
4-hydroxybenzoate polyprenyltransferase; Belongs to the UbiA prenyltransferase family.
  
 
 0.769
GAQ94389.1
Magnesium chelatase subunit D.
  
  
 0.686
TAGGR_347
Nucleotide-binding universal stress protein, UspA family.
       0.661
TAGGR_345
BirA family transcriptional regulator, biotin operon repressor.
  
    0.658
TAGGR_344
L-ascorbate metabolism protein UlaG, beta-lactamase superfamily.
       0.653
Your Current Organism:
Thermodesulfovibrio aggregans
NCBI taxonomy Id: 86166
Other names: DSM 17283, JCM 13213, T. aggregans, Thermodesulfovibrio aggregans Sekiguchi et al. 2008, Thermodesulfovibrio sp. TGE-P1, strain TGE-P1
Server load: low (32%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.