STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_900162675_00089Unannotated protein. (296 aa)    
Predicted Functional Partners:
GCA_900162675_00058
Unannotated protein.
  
 0.990
GCA_900162675_00086
Unannotated protein.
  
 0.983
GCA_900162675_00087
Unannotated protein.
   
 0.983
GCA_900162675_02138
Unannotated protein.
 
 0.964
GCA_900162675_00748
Unannotated protein.
 
 
 
 0.932
GCA_900162675_00057
Unannotated protein.
 
 
 0.917
GCA_900162675_00084
Unannotated protein.
   
 
 0.915
GCA_900162675_00048
Unannotated protein.
  
 0.905
GCA_900162675_00088
Unannotated protein.
 
   
 0.904
GCA_900162675_00053
Unannotated protein.
   
 0.902
Your Current Organism:
Halomonas utahensis
NCBI taxonomy Id: 86177
Other names: DSM 3051, H. utahensis, Pseudomonas halophila, bacterium ES1D1, strain II
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.