STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_900162675_00287Unannotated protein. (399 aa)    
Predicted Functional Partners:
GCA_900162675_00286
Unannotated protein.
 
 0.985
GCA_900162675_00064
Unannotated protein.
 
 
 0.960
GCA_900162675_01085
Unannotated protein.
 
 
 0.958
GCA_900162675_00742
Unannotated protein.
 
 
 0.956
GCA_900162675_01081
Unannotated protein.
 
 
 0.939
GCA_900162675_01701
Unannotated protein.
 
  
 0.883
GCA_900162675_02393
Unannotated protein.
 
 
 0.865
GCA_900162675_01247
Unannotated protein.
    
   0.840
GCA_900162675_03210
Unannotated protein.
    
 0.690
GCA_900162675_01082
Unannotated protein.
  
 
 0.649
Your Current Organism:
Halomonas utahensis
NCBI taxonomy Id: 86177
Other names: DSM 3051, H. utahensis, Pseudomonas halophila, bacterium ES1D1, strain II
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.