STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_900162675_00359Unannotated protein. (254 aa)    
Predicted Functional Partners:
GCA_900162675_01694
Unannotated protein.
  
 0.941
GCA_900162675_02961
Unannotated protein.
    
 0.924
GCA_900162675_00037
Unannotated protein.
    
 0.923
GCA_900162675_02094
Unannotated protein.
    
 0.920
GCA_900162675_01713
Unannotated protein.
    
  0.919
GCA_900162675_01714
Unannotated protein.
    
  0.919
GCA_900162675_00410
Unannotated protein.
   
 0.918
GCA_900162675_02317
Unannotated protein.
   
 0.918
GCA_900162675_02544
Unannotated protein.
   
 0.918
GCA_900162675_00361
Unannotated protein.
   
  0.901
Your Current Organism:
Halomonas utahensis
NCBI taxonomy Id: 86177
Other names: DSM 3051, H. utahensis, Pseudomonas halophila, bacterium ES1D1, strain II
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.