STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_900162675_00534Unannotated protein. (142 aa)    
Predicted Functional Partners:
GCA_900162675_00533
Unannotated protein.
  
  
 0.943
GCA_900162675_00535
Unannotated protein.
  
  
 0.937
GCA_900162675_00536
Unannotated protein.
  
    0.897
GCA_900162675_02237
Unannotated protein.
   
   0.848
GCA_900162675_00699
Unannotated protein.
   
   0.810
GCA_900162675_00537
Unannotated protein.
  
    0.801
GCA_900162675_00538
Unannotated protein.
       0.577
GCA_900162675_00706
Unannotated protein.
   
    0.574
GCA_900162675_00525
Unannotated protein.
       0.540
GCA_900162675_01908
Unannotated protein.
 
    0.470
Your Current Organism:
Halomonas utahensis
NCBI taxonomy Id: 86177
Other names: DSM 3051, H. utahensis, Pseudomonas halophila, bacterium ES1D1, strain II
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.