STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_900162675_01442Unannotated protein. (395 aa)    
Predicted Functional Partners:
GCA_900162675_00089
Unannotated protein.
 
  
 0.794
GCA_900162675_02138
Unannotated protein.
    
 0.740
GCA_900162675_03243
Unannotated protein.
    
 0.660
GCA_900162675_00086
Unannotated protein.
   
 
 0.642
GCA_900162675_00748
Unannotated protein.
     
 0.633
GCA_900162675_02639
Unannotated protein.
    
 0.617
GCA_900162675_02735
Unannotated protein.
    
 0.617
GCA_900162675_00761
Unannotated protein.
    
  0.603
GCA_900162675_00090
Unannotated protein.
 
  
 0.594
GCA_900162675_00048
Unannotated protein.
   
 
 0.573
Your Current Organism:
Halomonas utahensis
NCBI taxonomy Id: 86177
Other names: DSM 3051, H. utahensis, Pseudomonas halophila, bacterium ES1D1, strain II
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.