STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFM01255.1Hypothetical protein. (381 aa)    
Predicted Functional Partners:
gyrB2
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; COG: COG0187; Pfam: PF02518,PF00204; InterPro: IPR001241.
     
 0.806
EFM01269.1
Cupin domain protein; COG: COG1396; Pfam: PF01381,PF07883; InterPro: IPR014710.
  
 
 0.580
gph2
HAD hydrolase, family IA, variant 3; COG: COG0546; Pfam: PF00702; InterPro: IPR005834.
       0.560
EFM01254.1
Peptidase C1-like family; Pfam: PF03051; Belongs to the peptidase C1 family.
       0.560
ctpA2
Peptidase, S41 family; COG: COG0793; Pfam: PF03572; InterPro: IPR004447; Belongs to the peptidase S41A family.
  
    0.533
EFM01351.1
NAD dependent epimerase/dehydratase family protein; COG: COG0451; Pfam: PF01370; InterPro: IPR016040.
 
  
 0.527
guaA
GMP synthase (glutamine-hydrolyzing) domain protein; Catalyzes the synthesis of GMP from XMP.
 
   
 0.480
EFM02928.1
Hypothetical protein.
 
    0.455
EFM03000.1
Peptidase M16 inactive domain protein; Pfam: PF00675,PF05193; InterPro: IPR011237; Belongs to the peptidase M16 family.
  
 
   0.434
EFM01252.1
Transporter, major facilitator family protein; Pfam: PF07690; InterPro: IPR011701.
       0.433
Your Current Organism:
Prevotella marshii
NCBI taxonomy Id: 862515
Other names: P. marshii DSM 16973 = JCM 13450, Prevotella marshii DSM 16973, Prevotella marshii DSM 16973 = DSM 16973, Prevotella marshii DSM 16973 = JCM 13450, Prevotella marshii E9.34, Prevotella marshii JCM 13450
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.