STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFM25645.1Citrate transporter; COG: COG0471; Pfam: PF03600. (412 aa)    
Predicted Functional Partners:
EFM25644.1
Hypothetical protein; Belongs to the uroporphyrinogen decarboxylase family.
  
    0.736
EFM25646.1
Hypothetical protein; COG: COG3681; Pfam: PF06354; InterPro: IPR010469; Belongs to the UPF0597 family.
       0.651
citXG
Putative triphosphoribosyl-dephospho-CoA synthase; Pfam: PF01874.
  
  
 0.515
EFM26096.1
Chloride transporter, ClC family; COG: COG0038; Pfam: PF00654,PF02080; InterPro: IPR001807.
  
  
 0.465
Your Current Organism:
Peptoniphilus duerdenii
NCBI taxonomy Id: 862517
Other names: P. duerdenii ATCC BAA-1640, Peptoniphilus duerdenii ATCC BAA-1640, Peptoniphilus duerdenii WAL 18896
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.