STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFM25368.1ABC transporter, solute-binding protein; COG: COG4134; Pfam: PF01547. (425 aa)    
Predicted Functional Partners:
EFM25369.1
ABC transporter, permease protein; Pfam: PF00528.
 
  
  0.970
EFM25370.1
ABC transporter, permease protein; Pfam: PF00528.
 
  
  0.970
EFM25372.1
Inosine-uridine preferring nucleoside hydrolase; Pfam: PF01156; InterPro: IPR001910.
 
     0.947
EFM25364.1
SNARE-like domain protein; COG: COG0398; Pfam: PF09335; InterPro: IPR015414.
 
  
 0.942
EFM25365.1
SNARE-like domain protein; COG: COG0398; Pfam: PF09335; InterPro: IPR015414.
 
  
 0.937
EFM25363.1
Hypothetical protein.
 
     0.929
EFM25366.1
Glycosyltransferase, group 2 family protein; Pfam: PF00535.
 
     0.895
EFM25367.1
4Fe-4S binding domain protein; Pfam: PF00037.
 
     0.891
EFM25371.1
ABC transporter, ATP-binding protein; COG: COG3842; Pfam: PF00005; InterPro: IPR003593.
    
  0.869
EFM25362.1
Rhodanese-like protein; COG: COG0607; Pfam: PF00581; InterPro: IPR001763.
       0.622
Your Current Organism:
Peptoniphilus duerdenii
NCBI taxonomy Id: 862517
Other names: P. duerdenii ATCC BAA-1640, Peptoniphilus duerdenii ATCC BAA-1640, Peptoniphilus duerdenii WAL 18896
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.